Fall Seminar Series - September 8, 2005
University of Minnesota
School of Statistics
College of Liberal Arts

An Algorithm in Choosing Significant PCA Components on Expression Microarrays

I-Ping Tu
Institute of Statistical Science
Academia Sinica, Taiwan

Thursday, September 8, 2005
3:30 PM, 115 Ford Hall
Minneapolis, East Bank Campus
Social at 3:00 PM, 300 Ford Hall

Abstract

PCA (Principal Component Analysis) is one of the oldest and best known statistical tools for multivariate analysis. Even in earlier ages, PCA has been applied fruitfully by physicists in solving the motions of rigid bodies in classical mechanics. In the example of the motion of a top, the first principal component (with the largest eigenvalue) is the direction of the axis around which the top can spin stably. Adopting this insight, we proposed an algorithm based on robustness properties to choose statistically significant components of PCA. We will use a Microarray data set to demonstrate this algorithm.